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John lives with burning pain in his throat for an hour or two after he eats specific foods. It hurts very badly, and John finds a new food every day that causes his throat problems. John and his friends wanted to write a book to raise awareness. Eosinophil-associated diseases are on the rise. Yet, many patients suffering from these disorders go undiagnosed for years due to a lack of information or awareness of these diseases. John, who lives with Eosinophilic Esophagitis, wanted to learn more about the disease. He gathered his friends, Kaitlyn and Andrew, to join him on a quest to unlock the secrets of EoE. Come along with these brave adventurers as they meet the mighty Wizard Rothenberg, who leads them through the Valley of the Esophagus.All proceeds go toward Cincinnati Children's Hospital and the continuing efforts of Dr. Rothenburg to seek a cure for EOE.
Recent social and political psychological research indicates that increased access to ancestry testing has strengthened the notion of genetic essentialism among some groups, or the idea that our biology ties us to particular ethnic identities. Using research from both the social sciences and the genetics literature as support, Ancestry Reimagined establishes realistic expectations about what we can learn from our DNA as a foundation for examining the psychological impact of ancestry testing, including the differences between how this information is perceived versus its reality.
This volume provides a collection of protocols from researchers in the statistical genomics field. Chapters focus on integrating genomics with other ¿omics¿ data, such as transcriptomics, epigenomics, proteomics, metabolomics, and metagenomics. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.Cutting-edge and thorough, Statistical Genomics hopes that by covering these diverse and timely topics researchers are provided insights into future directions and priorities of pan-omics and the precision medicine era.
This detailed volume focuses on genotyping and validation in addition to information on how to produce gene edited cells and animals for research. Future advances in biomedical research will benefit greatly from the use of precise gene targeting of transgenes in the genome as CRISPR technology supersedes earlier methods that relied on random transgene integration, which this collection reflects. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, as well as tips for troubleshooting and avoiding known pitfalls. Authoritative and practical, Transgenesis: Methods and Protocols serves as an ideal guide for researchers working with or working on genetically modified models.
This laboratory manual includes the latest tools and techniques involved in genomic research. It starts with an introductory chapter on genomics and the various tools and applications involved. The initial chapters present protocols for basic techniques such as DNA isolation, electrophoresis, PCR, cDNA synthesis etc. The book then goes on to describe more advanced techniques such as next-generation sequencing, exome sequencing, use of RNAi, RNAseq, genome editing, single cell genomics etc. Each topic includes a brief description, information on the principles involved, materials & methods, protocol, and expected results, with diagrams and graphs. All protocols are presented in a very lucid and precise way, to make it easy for readers to follow and replicate them.
Microbiome research has focused on microorganisms that live within the human body and their effects on health. During the last few years, the quantification of microbiome composition in different environments has been facilitated by the advent of high throughput sequencing technologies. The statistical challenges include computational difficulties due to the high volume of data; normalization and quantification of metabolic abundances, relative taxa and bacterial genes; high-dimensionality; multivariate analysis; the inherently compositional nature of the data; and the proper utilization of complementary phylogenetic information. This has resulted in an explosion of statistical approaches aimed at tackling the unique opportunities and challenges presented by microbiome data.This book provides a comprehensive overview of the state of the art in statistical and informatics technologies for microbiome research. In addition to reviewing demonstrably successful cutting-edge methods, particular emphasis is placed on examples in R that rely on available statistical packages for microbiome data. With its wide-ranging approach, the book benefits not only trained statisticians in academia and industry involved in microbiome research, but also other scientists working in microbiomics and in related fields.
This book celebrates the dawn of the rye genomics era with concise, comprehensive, and accessible reviews on the current state of rye genomic research, written by experts in the field for students, researchers and growers. To most, rye is the key ingredient in a flavoursome bread or their favourite American whisky. To a farmer, rye is the remarkable grain that tolerates the harshest winters and the most unforgiving soils, befitting its legacy as the life-giving seed that fed the ancient civilisations of northern Eurasia.Since the mid-1900s, scientists have employed genetic approaches to better understand and utilize rye, but only since the technological advances of the mid-2010s has the possibility of addressing questions using rye genome assemblies become a reality. Alongside the secret of its unique survival abilities, rye genomics has accelerated research on a host of intriguing topics such as the complex history of rye¿s domestication by humans, the natureof genes that switch fertility on and off, the function and origin of accessory chromosomes, and the evolution of selfish DNA.
Hormonal Cross-Talk, Plant Defense and Development: Plant Biology, Sustainability and Climate Change focuses specifically on plants and their interaction to auxins, gibberellins, cytokinins, ethylene, abscisic acid, jasmonates, brassinosteroids, strigolactones, and the potential those interactions offer for improved plant health and production. Plant hormones (auxins, gibberellins, cytokinins, ethylene, abscisic acid, jasmonates, brassinosteroids, salicylic acid, strigolactones etc.) regulate numerous aspects of plant growth and developmental processes. Each hormone initiates a specific molecular pathway, with each pathway integrated in a complex network of synergistic, antagonistic and additive interactions. This is a valuable reference for those seeking to understand and improve plant health using natural processes. The cross-talks of auxins - abscisic acid, auxins - brassinosteroids, brassinosteroids- abscisic acid, ethylene - abscisic acid, brassinosteroids - ethylene, cytokinins - abscisic acid, brassinosteroids - jasmonates, brassinosteroids - salicylic acid, and gibberellins - jasmonates - strigolactones have been shown to regulate a number of biological processes in plant system. The cross-talk provides robustness to the plant immune system but also drives specificity of induced defense responses against the plethora of biotic and abiotic interactions.
Biofortification of Grain and Vegetable Crops: Molecular and Breeding Approaches is a comprehensive overview of important food crops whose vitamin and mineral enhancement can contribute significantly to improved food and nutrition security. Providing the latest information on crops including cereals, oilseeds, legumes and vegetables, this book provides details of agronomic and molecular resources for enhanced mineral production. Each chapter focuses on a specific food crop and the unique opportunities offered by each through breeding practices. This will be a valuable resource for researchers, academics and those in industry who are exploring biotechnological approaches as a powerful tool to combat malnutrition.
Cash crops are grown and sold for monetary gain and not necessarily for sustenance. They include coffee, tea, coconut, cotton, jute, groundnut, castor, linseed, cocoa, rubber, cassava, soybean, sweet potato, potato, wheat, corn and teff. While some of these crops have been improved for realizing yield potential, breeding of many of them is still in infancy. Crops that underwent rigorous breeding have eventually lost much of the diversity due to extensive cultivation with a few improved varieties and the diversity in less bred species is to be conserved. Over the past years, scholars and policy makers have become increasingly aware of the short and long-run impact of climatic factors on economic, food security, social and political outcomes . Genetic diversity, natural and induced, is much needed for the future generations to sustain food production with more climate resilient crops. In contrast, crop uniformity produced across the farm fields in the form ofimproved varieties is genetically vulnerable to biotic and abiotic stresses. Thus, it is essential and challenging to address the issue of compromising between maximizing crop yield under a given set of conditions and minimizing the risk of crop failure when conditions change. Cash crops are grown in an array of climatic conditions. Many of the world¿s poor still live in rural areas. Many are subsistence farmers, operating very small farms using very little agricultural inputs for achieving marketable outputs. Conserving the diversity of these crops and addressing all issues of crop culture through modern tools of biotechnology and genomics is a real challenge. We believe the focus of this book is to fill an unmet need of this and other grower communities by providing the necessary knowledge, albeit indirectly via the academics, to manage the risks of cash crops breeding through managing genetic diversity.
This book explores the answers to fundamental questions about the human mind and human behaviour with the help of two ancient texts. The first is Oedipus Rex (Oedipus Tyrannus) by Sophocles, written in the 5th century BCE. The second is human DNA, with its origins around 4 billion years ago, and continuously revised by chance and evolution. With Sophocles as a guide, the authors take a journey into the Genomic era, an age marked by ever-expanding insights into the human genome. Over the course of this journey, the book explores themes of free will, fate, and chance; prediction, misinterpretation, and the burden that comes with knowledge of the future; self-fulfilling and self-defeating prophecies; the forces that contribute to similarities and differences among people; roots and lineage; and the judgement of oneself and others.Using Oedipus Rex as its lens, this novel work provides an engaging overview of behavioural genetics that demonstrates its relevance across the humanities and the social and life sciences. It will appeal in particular to students and scholars of genetics, education, psychology, sociology, and law.
The Regulatory Genome in Adaptation, Evolution, Development, and Disease synthesizes insights from recent genomic and gene expression studies across organisms, from humans to plants, animals, and single cell life, exploring common roles gene regulation plays in adaptive evolution, developmental biology and susceptibility to disease. The book sheds light on gene regulation across evolutionary timelines, illuminating new areas of focus and future research. Chapters consider key elements in gene expression regulation, fundamentals of genomic alterations over time, and in response to environmental and local conditions, epigenetics in adaptive evolution, and adaptive gene regulation in healthy processes and developmental biology, and in disease biology. Throughout the book, a comparative approach is adopted across organisms to highlight common evolutionary themes and genome diversity revealed by recent sequencing and GWAS studies, as well as how this informs our understanding of human adaptive evolution. The book finishes by detailing how we can use this knowledge to impact disease outcomes and healthy human metabolism, development, and physiology.
This book serves as a brief introduction to phylogenetic trees and molecular evolution for biologists and biology students. It does so by presenting the main concepts in a variety of ways: first visually, then in a history, next in a dice game, and finally in simple equations. The content is primarily designed to introduce upper-level undergraduate and graduate students of biology to phylogenetic tree reconstruction and the underlying models of molecular evolution. A unique feature also of interest to experienced researchers is the emphasis on simple ways to quantify the uncertainty in the results more fully than is possible with standard methods.
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